CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GI12981
(
Drosophila mojavensis
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
FBgn0135738
T43580_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0162198
RRM
95
167
LYVGNLTWWTTDQDISNALREIGVNDLQEVKFFENRANGQSKGFSVISLGSEPSLRTVLDQLPKKEMHGQTVV
Links
Other
RRM
family RBPs
Other
Drosophila mojavensis
RBPs
14 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GH15377
Drosophila grimshawi
FBgn0122849
N
1.000
GJ13124
Drosophila virilis
FBgn0200351
N
1.000
GA20165-RA
Drosophila pseudoobscura
FBgn0080160
N
0.904
GK16997
Drosophila willistoni
FBgn0218996
N
0.904
GF23561
Drosophila ananassae
FBgn0100555
N
0.890
GM24949
Drosophila sechellia
FBgn0179810
N
0.890
GD13000
Drosophila simulans
FBgn0184723
N
0.877
GG15090
Drosophila erecta
FBgn0107344
N
0.877
GE21315
Drosophila yakuba
FBgn0238580
N
0.877
CG7185
Drosophila melanogaster
FBgn0035872
N
0.877
PHUM544500
Pediculus humanus
PHUM544500
N
0.753
AAEL017164
Aedes aegypti
AAEL017164
N
0.740
AGAP005062
Anopheles gambiae
AGAP005062
N
0.726
amel4_ncbi_hmm23479
Apis mellifera
amel4_ncbi_hmm23479
N
0.712