LOC_Os11g04390 (Oryza sativa)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 LOC_Os11g04390 T45151_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os11g04390.1 RRM 112 180
LOC_Os11g04390.1 RRM 190 258
LOC_Os11g04390.1 RRM 283 352
LOC_Os11g04390.2 RRM 1 40
LOC_Os11g04390.2 RRM 50 119
LOC_Os11g04390.2 RRM 143 212
LOC_Os11g04390.3 RRM 34 103

Links

Other RRM family RBPs
Other Oryza sativa RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
BGIOSIBCE033414 Oryza indica BGIOSIBCE033414 N 1.000
BGIOSIBCE035668 Oryza indica BGIOSIBCE035668 N 0.990
LOC_Os12g04180 Oryza sativa LOC_Os12g04180 N 0.990
BRADI4G26487 Brachypodium distachyon BRADI4G26487 N 0.750
GRMZM2G101867 Zea mays GRMZM2G101867 N 0.742
SB05G002300 Sorghum bicolor Sb05g002300 N 0.732
GRMZM2G075942 Zea mays GRMZM2G075942 N 0.732
PDK_20s1300948g005 Phoenix dactylifera PDK_20s1300948g005 N 0.708