CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CMU_016700
(
Cryptosporidium muris
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CMU_016700
T46492_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CMU_016700
RRM
39
109
IYIGGLNYGLTEGDIVIVFSQWGEPIDVNLIRDPKTGKSKGFCFLAYEDQQSTILAVDNANDMILLGNKLK
Links
Other
RRM
family RBPs
Other
Cryptosporidium muris
RBPs
8 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
cgd6_3490
Cryptosporidium parvum
cgd6_3490
N
0.775
PCHAS_080610
Plasmodium chabaudi
PCHAS_080610
N
0.746
PBANKA_080580
Plasmodium berghei
PBANKA_080580
N
0.746
NCLIV_024340
Neospora caninum
NCLIV_024340
N
0.732
PVX_095260
Plasmodium vivax
PVX_095260
N
0.718
PFC0865w
Plasmodium falciparum
PFC0865w
N
0.718
PKH_082150
Plasmodium knowlesi
PKH_082150
N
0.718
PredSwiss_CON1238.1
Pneumocystis carinii
PredSwiss_CON1238.1
N
0.704