CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PFC0865w
(
Plasmodium falciparum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
PFC0865w
T47388_0.6
EuPathDB (2010-Sep-21)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PFC0865w
RRM
38
108
IYIGNLDNRLTEGDIVIVFSQYGEPIDVNLVRDNETGKSKGYCFLSYADQRSTILAVDNFNGYKLLERPLV
Links
Other
RRM
family RBPs
Other
Plasmodium falciparum
RBPs
12 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PKH_082150
Plasmodium knowlesi
PKH_082150
N
0.915
PVX_095260
Plasmodium vivax
PVX_095260
N
0.915
PCHAS_080610
Plasmodium chabaudi
PCHAS_080610
N
0.901
PBANKA_080580
Plasmodium berghei
PBANKA_080580
N
0.887
TP01_0238
Theileria parva
TP01_0238
N
0.732
TA19570
Theileria annulata
TA19570
N
0.732
estExt_fgenesh1_pg.C_410012
Monosiga brevicollis
estExt_fgenesh1_pg.C_410012
N
0.718
CMU_016700
Cryptosporidium muris
CMU_016700
N
0.718
SOCG_02705
Schizosaccharomyces octosporus
SOCG_02705
N
0.704
PredSwiss_CON1238.1
Pneumocystis carinii
PredSwiss_CON1238.1
N
0.704
NCLIV_024340
Neospora caninum
NCLIV_024340
N
0.704
SPOG_02298
Schizosaccharomyces cryophilus
SPOG_02298
N
0.704