cassava29087.valid.m1 (Manihot esculenta)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 cassava29087.valid.m1 T49258_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
cassava29087.valid.m1 RRM 204 273

Links

Other RRM family RBPs
Other Manihot esculenta RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava30484.valid.m1 Manihot esculenta cassava30484.valid.m1 N 0.943
29905.m000431 Ricinus communis 29905.m000431 N 0.857
Glyma08g27040.1 Glycine max Glyma08g27040.1 N 0.814
Glyma18g50250.1 Glycine max Glyma18g50250.1 N 0.800
PK12047.1 Cannabis sativa PK12047.1 N 0.786
ppa005348m Prunus persica ppa005348m N 0.771
MDP0000270535 Malus x domestica MDP0000270535 N 0.771
MDP0000269053 Malus x domestica MDP0000269053 N 0.771
GSVIVG00032909001 Vitis vinifera GSVIVG00032909001 N 0.743
GSVIVG00008107001 Vitis vinifera GSVIVG00008107001 N 0.714
GSVIVG00003923001 Vitis vinifera GSVIVG00003923001 N 0.700