Cucsa.112520 (Cucumis sativus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Cucsa.112520 T49556_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.112520.1 RRM 91 161
Cucsa.112520.2 RRM 91 157

Links

Other RRM family RBPs
Other Cucumis sativus RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Glyma16g34330.1 Glycine max Glyma16g34330.1 N 0.930
GSVIVG00029394001 Vitis vinifera GSVIVG00029394001 N 0.887
ppa019414m Prunus persica ppa019414m N 0.873
B9I4X6_POPTR Populus trichocarpa POPTR_0012s03520 N 0.859
PK27275.1 Cannabis sativa PK27275.1 N 0.859
mgf002289m Mimulus guttatus mgf002289m N 0.845
MDP0000795431 Malus x domestica MDP0000795431 N 0.836
LOC_Os04g49440 Oryza sativa LOC_Os04g49440 N 0.831
XM_002888885.1 Arabidopsis lyrata fgenesh2_kg.2__1616__AT1G73530.1 N 0.746
AT1G73530 Arabidopsis thaliana AT1G73530-TAIR-G N 0.718