e_gw.9.159.1 (Branchiostoma floridae)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 e_gw.9.159.1 T50260_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
G3BP2
M021_0.6 		Homo sapiens AGGAUDR RNAcompete
Ray et al.(2013)
RNCMPT00021 		0.714
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw.9.159.1 RRM 319 388

Links

Other RRM family RBPs
Other Branchiostoma floridae RBPs

46 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
e_gw.517.12.1 Branchiostoma floridae e_gw.517.12.1 I 1.000
G3BP2 Oryzias latipes ENSORLG00000007012 I 0.743
G3BP2 Tetraodon nigroviridis ENSTNIG00000011044 I 0.743
g3bp2 Danio rerio ENSDARG00000014790 I 0.743
G3BP2 Anolis carolinensis ENSACAG00000008695 I 0.729
g3bp2 Xenopus tropicalis ENSXETG00000000334 I 0.729
G3BP2 Dasypus novemcinctus ENSDNOG00000012491 I 0.729
G3BP2 Takifugu rubripes ENSTRUG00000011405 I 0.729
G3BP2 Ochotona princeps ENSOPRG00000006307 I 0.714
G3BP2 Procavia capensis ENSPCAG00000015109 I 0.714
G3BP2 Otolemur garnettii ENSOGAG00000000157 I 0.714
G3BP2 Oryctolagus cuniculus ENSOCUG00000003262 I 0.714
ENSOANG00000004714 Ornithorhynchus anatinus ENSOANG00000004714 I 0.714
G3bp2 Mus musculus ENSMUSG00000029405 I 0.714
ENSPPYG00000014846 Pongo pygmaeus ENSPPYG00000014846 I 0.714
G3BP2 Sorex araneus ENSSARG00000009503 I 0.714
G3BP2 Taeniopygia guttata ENSTGUG00000001561 I 0.714
G3BP2 Vicugna pacos ENSVPAG00000010710 I 0.714
ENSTBEG00000012323 Tupaia belangeri ENSTBEG00000012323 I 0.714
G3BP2 Monodelphis domestica ENSMODG00000019205 I 0.714
G3BP2 Pteropus vampyrus ENSPVAG00000010166 I 0.714
G3bp2 Rattus norvegicus ENSRNOG00000002433 I 0.714
G3BP2 Pan troglodytes ENSPTRG00000016175 I 0.714
G3BP2 Myotis lucifugus ENSMLUG00000004753 I 0.714
G3BP2 Equus caballus ENSECAG00000007917 I 0.714
G3BP2 Erinaceus europaeus ENSEEUG00000013436 I 0.714
G3BP2 Macaca mulatta ENSMMUG00000002153 I 0.714
G3bp2 Dipodomys ordii ENSDORG00000004825 I 0.714
G3BP2 Cavia porcellus ENSCPOG00000012052 I 0.714
Q2KJ17_BOVIN Bos taurus ENSBTAG00000014041 I 0.714
G3BP2 Canis familiaris ENSCAFG00000008371 I 0.714
LOC100413275 Callithrix jacchus ENSCJAG00000019897 I 0.714
G3BP2 Homo sapiens ENSG00000138757 D 0.714
G3BP2 Felis catus ENSFCAG00000010124 I 0.714
G3BP2 Gasterosteus aculeatus ENSGACG00000017342 I 0.714
G3BP2 Microcebus murinus ENSMICG00000007795 I 0.714
G3BP2 Macropus eugenii ENSMEUG00000004126 I 0.714
G3BP2 Loxodonta africana ENSLAFG00000023321 I 0.714
Ame_R007258 Ailuropoda melanoleuca Ame_R007258 I 0.714
G3BP2 Gallus gallus ENSGALG00000010882 I 0.714
G3BP2 Gorilla gorilla ENSGGOG00000014947 I 0.714
G3BP2 Meleagris gallopavo ENSMGAG00000007221 I 0.714
G3BP2 Danio rerio ENSDARG00000074572 I 0.700
ENSTBEG00000008258 Tupaia belangeri ENSTBEG00000008258 I 0.700
ENSDARG00000011704 Danio rerio ENSDARG00000011704 I 0.700
G3BP2 Tursiops truncatus ENSTTRG00000013795 I 0.700