estExt_Genewise1.C_31032 (Trichoderma atroviride)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_Genewise1.C_31032 T51248_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1.C_31032 RRM 5 70

Links

Other RRM family RBPs
Other Trichoderma atroviride RBPs

13 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1.C_60393 Trichoderma virens estExt_Genewise1.C_60393 N 0.955
estExt_GeneWisePlus.C_80814 Trichoderma reesei estExt_GeneWisePlus.C_80814 N 0.924
estExt_fgenesh1_pm.C_sca_2_chr3_3_00106 Nectria haematococca estExt_fgenesh1_pm.C_sca_2_chr3_3_00106 N 0.848
FOXG_03456 Fusarium oxysporum FOXG_03456 N 0.803
FVEG_02326 Fusarium verticillioides FVEG_02326 N 0.803
GLRG_09758 Colletotrichum graminicola GLRG_09758 N 0.788
FGSG_08365 Fusarium graminearum FGSG_08365 N 0.773
MGG_00444 Magnaporthe oryzae MGG_00444 N 0.758
estExt_fgenesh1_kg.C_90119 Cryphonectria parasitica estExt_fgenesh1_kg.C_90119 N 0.742
estExt_fgenesh1_kg.C_50117 Myceliophthora thermophila estExt_fgenesh1_kg.C_50117 N 0.742
VDBG_09184 Verticillium albo atrum VDBG_09184 N 0.727
VDAG_07347 Verticillium dahliae VDAG_07347 N 0.727
Pa_4_3880 Podospora anserina Pa_4_3880 N 0.712