CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
estExt_Genewise1.C_820021
(
Melampsora laricis populina
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
estExt_Genewise1.C_820021
T51310_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1.C_820021
RRM
200
270
VYLGRIPHGFHEEEMKGYFSQFGEIRRVRLSRNRRTGKSKHYGFIEFKHKEVAEIVAETLHNYLLCGNMLQ
Links
Other
RRM
family RBPs
Other
Melampsora laricis populina
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PGTG_07909
Puccinia graminis
PGTG_07909
N
0.775
e_gw1.10.335.1
Mucor circinelloides
e_gw1.10.335.1
N
0.746
PTTG_07308
Puccinia triticina
PTTG_07308
N
0.746
RO3G_08088
Rhizopus oryzae
RO3G_08088
N
0.732