RO3G_08088 (Rhizopus oryzae)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 RO3G_08088 T30455_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
RO3T_08087 RRM 164 234

Links

Other RRM family RBPs
Other Rhizopus oryzae RBPs

30 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Medtr1g137330 Medicago truncatula Medtr1g137330 N 0.775
Medtr8g129780 Medicago truncatula Medtr8g129780 N 0.761
e_gw1.10.335.1 Mucor circinelloides e_gw1.10.335.1 N 0.761
AMAG_03225 Allomyces macrogynus AMAG_03225 N 0.761
CC1G_06273 Coprinopsis cinerea CC1G_06273 N 0.746
estExt_Genewise1.C_820021 Melampsora laricis populina estExt_Genewise1.C_820021 N 0.732
Glyma09g17080.1 Glycine max Glyma09g17080.1 N 0.732
Glyma02g29190.1 Glycine max Glyma02g29190.1 N 0.732
B9HW06_POPTR Populus trichocarpa POPTR_0010s24120 N 0.732
DEHA0A05764g Debaryomyces hansenii DEHA0A05764g N 0.732
SPPG_07834 Spizellomyces punctatus SPPG_07834 N 0.732
fgeneshTM_pg.1_#_1063 Tremella mesenterica fgeneshTM_pg.1_#_1063 N 0.732
fgenesh1_pg.C_scaffold_1000567 Sporobolomyces roseus fgenesh1_pg.C_scaffold_1000567 N 0.732
PGTG_07909 Puccinia graminis PGTG_07909 N 0.718
fgenesh1_pg.C_scaffold_4000265 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_4000265 N 0.718
estExt_Genewise1Plus.C_61440 Thielavia terrestris estExt_Genewise1Plus.C_61440 N 0.718
e_gw1.87.91.1 Postia placenta e_gw1.87.91.1 N 0.718
estExt_fgenesh1_pg.C_90140 Trichoderma atroviride estExt_fgenesh1_pg.C_90140 N 0.718
estExt_Genewise1Plus.C_200094 Postia placenta estExt_Genewise1Plus.C_200094 N 0.718
FGSG_04392 Fusarium graminearum FGSG_04392 N 0.704
PABG_04180 Paracoccidioides brasiliensis PABG_04180 N 0.704
PTTG_07308 Puccinia triticina PTTG_07308 N 0.704
e_gw1.11.592.1 Nectria haematococca e_gw1.11.592.1 N 0.704
29428.m000321 Ricinus communis 29428.m000321 N 0.704
ppa025985m Prunus persica ppa025985m N 0.704
e_gw1.1.997.1 Trichoderma reesei e_gw1.1.997.1 N 0.704
GSTUMT00006382001 Tuber melanosporum GSTUMT00006382001 N 0.704
Pa_3_7140 Podospora anserina Pa_3_7140 N 0.704
e_gw1.17.425.1 Trichoderma virens e_gw1.17.425.1 N 0.704
e_gw1.1.503.1 Phycomyces blakesleeanus e_gw1.1.503.1 N 0.704