fgenesh1_pm.C_scaffold_5000207 (Schizophyllum commune)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh1_pm.C_scaffold_5000207 T52085_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.C_scaffold_5000207 RRM 116 185

Links

Other RRM family RBPs
Other Schizophyllum commune RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
genemark.9242_g Pleurotus ostreatus genemark.9242_g N 0.886
fgenesh3_pm.C_scaffold_11000048 Laccaria bicolor fgenesh3_pm.C_scaffold_11000048 N 0.871
CC1G_12379 Coprinopsis cinerea CC1G_12379 N 0.871
fgenesh2_pm.3_#_206 Agaricus bisporus fgenesh2_pm.3_#_206 N 0.857
estExt_fgenesh2_pm.C_110163 Heterobasidion annosum estExt_fgenesh2_pm.C_110163 N 0.857
fgenesh1_pg.C_scaffold_7000153 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_7000153 N 0.829
estExt_fgenesh3_pg.C_10163 Postia placenta estExt_fgenesh3_pg.C_10163 N 0.800
CNBG_0418 Cryptococcus neoformans CNBG_0418 N 0.700