gw1.8.122.1 (Sporobolomyces roseus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 gw1.8.122.1 T53378_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
gw1.8.122.1 RRM 8 79
gw1.8.122.1 RRM 100 170
gw1.8.122.1 RRM 232 296

Links

Other RRM family RBPs
Other Sporobolomyces roseus RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PGTG_08590 Puccinia graminis PGTG_08590 N 0.851
estExt_fgenesh1_pm.C_10116 Melampsora laricis populina estExt_fgenesh1_pm.C_10116 N 0.851
PTTG_06273 Puccinia triticina PTTG_06273 N 0.846
estExt_fgenesh2_kg.C_10652 Agaricus bisporus estExt_fgenesh2_kg.C_10652 N 0.817
estExt_fgenesh1_kg.C_10369 Schizophyllum commune estExt_fgenesh1_kg.C_10369 N 0.817
estExt_fgenesh2_pg.C_10913 Schizophyllum commune estExt_fgenesh2_pg.C_10913 N 0.817
gwh2.11.204.1 Phanerochaete chrysosporium gwh2.11.204.1 N 0.812
CC1G_03708 Coprinopsis cinerea CC1G_03708 N 0.812
estExt_Genewise1.C_1650013 Postia placenta estExt_Genewise1.C_1650013 N 0.812
estExt_Genewise1Plus.C_30831 Pleurotus ostreatus estExt_Genewise1Plus.C_30831 N 0.812
estExt_Genewise1Plus.C_850030 Postia placenta estExt_Genewise1Plus.C_850030 N 0.812
e_gww1.1.421.1 Laccaria bicolor e_gww1.1.421.1 N 0.808
estExt_Genewise1.C_11756 Heterobasidion annosum estExt_Genewise1.C_11756 N 0.808
estExt_fgenesh2_kg.C_11202 Serpula lacrymans estExt_fgenesh2_kg.C_11202 N 0.803
CNBG_5957 Cryptococcus neoformans CNBG_5957 N 0.774
estExt_fgeneshTM_pm.C_70082 Tremella mesenterica estExt_fgeneshTM_pm.C_70082 N 0.721