PredSwiss_ASS2010_4410.1 (Pneumocystis carinii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PredSwiss_ASS2010_4410.1 T54653_0.6 Pneumocystis Genome Project (2010-Oct-5)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PredSwiss_ASS2010_4410.1 RRM 42 112

Links

Other RRM family RBPs
Other Pneumocystis carinii RBPs

14 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PredSwiss_CON264.2 Pneumocystis carinii PredSwiss_CON264.2 N 1.000
KLLA0E19845g Kluyveromyces lactis KLLA0E19845g N 0.746
KLTH0B04950g Kluyveromyces thermotolerans KLTH0B04950g N 0.732
PIN4 Saccharomyces cerevisiae YBL051C N 0.732
539_YBL051C Saccharomyces paradoxus 539_YBL051C N 0.732
A7TMV9_VANPO Vanderwaltozyma polyspora A7TMV9_VANPO N 0.732
1510_YBL051C Saccharomyces mikatae 1510_YBL051C N 0.732
1078_YHR132C Saccharomyces bayanus 1078_YHR132C N 0.732
Skud_Contig1725.4 Saccharomyces kudriavzevii Skud_Contig1725.4 N 0.732
Scas_Contig500.6 Saccharomyces castellii Scas_Contig500.6 N 0.704
SJAG_00563 Schizosaccharomyces japonicus SJAG_00563 N 0.704
ZYRO0B02860g Zygosaccharomyces rouxii ZYRO0B02860g N 0.704
YALI0D15752g Yarrowia lipolytica YALI0D15752g N 0.704
ACR235W Ashbya gossypii ACR235W N 0.704