CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
KLTH0B04950g
(
Kluyveromyces thermotolerans
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
KLTH0B04950g
T57074_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
KLTH0B04950g
RRM
39
109
IVIKNIPFAIKKEQLLEVIAKMDLPLPYAFNYHFDNGVFRGLAFANFATTDETTQVVHSLNGKEIGGRKLR
Links
Other
RRM
family RBPs
Other
Kluyveromyces thermotolerans
RBPs
45 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Kwal_14810
Kluyveromyces waltii
Kwal_14810
N
0.958
KLLA0E19845g
Kluyveromyces lactis
KLLA0E19845g
N
0.944
SAKL0F11924g
Lachancea kluyveri
SAKL0F11924g
N
0.930
ACR235W
Ashbya gossypii
ACR235W
N
0.915
ZYRO0B02860g
Zygosaccharomyces rouxii
ZYRO0B02860g
N
0.901
Scas_Contig500.6
Saccharomyces castellii
Scas_Contig500.6
N
0.873
PGUG_01669
Candida guilliermondii
PGUG_01669
N
0.845
539_YBL051C
Saccharomyces paradoxus
539_YBL051C
N
0.831
A7TMV9_VANPO
Vanderwaltozyma polyspora
A7TMV9_VANPO
N
0.831
XP_002491986.1
Pichia pastoris
XP_002491986.1
N
0.831
Skud_Contig1725.4
Saccharomyces kudriavzevii
Skud_Contig1725.4
N
0.831
PIN4
Saccharomyces cerevisiae
YBL051C
N
0.831
1078_YHR132C
Saccharomyces bayanus
1078_YHR132C
N
0.831
1510_YBL051C
Saccharomyces mikatae
1510_YBL051C
N
0.831
PIN4
Candida albicans
orf19.2534
N
0.831
CTRG_00938
Candida tropicalis
CTRG_00938
N
0.831
CPAG_02687
Candida parapsilosis
CPAG_02687
N
0.831
Cd36_26480
Candida dubliniensis
Cd36_26480
N
0.831
LELG_00183
Lodderomyces elongisporus
LELG_00183
N
0.831
DEHA0A07766g
Debaryomyces hansenii
DEHA0A07766g
N
0.831
YALI0D15752g
Yarrowia lipolytica
YALI0D15752g
N
0.817
CLUG_00283
Candida lusitaniae
CLUG_00283
N
0.817
estExt_fgenesh1_pg.C_chr_8.10303
Pichia stipitis
estExt_fgenesh1_pg.C_chr_8.10303
N
0.817
CAGL0A04213g
Candida glabrata
CAGL0A04213g
N
0.761
estExt_fgenesh1_pg.C_chr_80368
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_80368
N
0.732
A7TQD0_VANPO
Vanderwaltozyma polyspora
A7TQD0_VANPO
N
0.732
PredSwiss_ASS2010_4410.1
Pneumocystis carinii
PredSwiss_ASS2010_4410.1
N
0.732
PredSwiss_CON264.2
Pneumocystis carinii
PredSwiss_CON264.2
N
0.732
GSTUMT00005304001
Tuber melanosporum
GSTUMT00005304001
N
0.718
SS1G_02057
Sclerotinia sclerotiorum
SS1G_02057
N
0.718
AB09303.1
Alternaria brassicicola
AB09303.1
N
0.704
TEQG_06159
Trichophyton equinum
TEQG_06159
N
0.704
HCAG_04905
Histoplasma capsulatum
HCAG_04905
N
0.704
MCYG_02010
Microsporum canis
MCYG_02010
N
0.704
BDBG_02675
Blastomyces dermatitidis
BDBG_02675
N
0.704
ARB_00840
Arthroderma benhamiae
ARB_00840
N
0.704
PMAA_039640
Penicillium marneffei
PMAA_039640
N
0.704
MGYG_04073
Microsporum gypseum
MGYG_04073
N
0.704
PABG_00017
Paracoccidioides brasiliensis
PABG_00017
N
0.704
TESG_06836
Trichophyton tonsurans
TESG_06836
N
0.704
TRV_07498
Trichophyton verrucosum
TRV_07498
N
0.704
TERG_04408
Trichophyton rubrum
TERG_04408
N
0.704
SJAG_00563
Schizosaccharomyces japonicus
SJAG_00563
N
0.704
PTRG_00597
Pyrenophora tritici repentis
PTRG_00597
N
0.704
estExt_fgenesh1_pm.C_190004
Cochliobolus heterostrophus C5
estExt_fgenesh1_pm.C_190004
N
0.704