CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Sjc_0074360
(
Schistosoma japonicum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
Sjc_0074360
T54835_0.6
SDSPB (2008-Sep-5)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPRT0000006995
RRM
4
66
VYVGRIPPRCTERDIERFFKGYGRLRDIVLKNGYGFVEFDNEKDADDAVYDLHGRDLRGERLI
CPRT0000006995
RRM
112
177
VIVENLSSRVSWQDLKDLMRKAGEVTYADAHKSAKNDGIVEFAAYADMKEAIEKFDGYELYGRRLR
Links
Other
RRM
family RBPs
Other
Schistosoma japonicum
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Smp_036270
Schistosoma mansoni
Smp_036270
N
1.000
CPIJ008634
Culex quinquefasciatus
CPIJ008634
I
0.713
CpipJ_CPIJ008634
Culex pipiens
CpipJ_CPIJ008634
I
0.713