Scas_Contig621.10 (Saccharomyces castellii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Scas_Contig621.10 T54893_0.6 SGD (2003-Oct-3)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig621.10 RRM 164 234
Scas_Contig621.10 RRM 264 334

Links

Other RRM family RBPs
Other Saccharomyces castellii RBPs

17 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
8944_YGR159C Saccharomyces paradoxus 8944_YGR159C N 0.901
NSR1 Saccharomyces cerevisiae YGR159C N 0.887
8840_YGR159C Saccharomyces mikatae 8840_YGR159C N 0.887
Skud_Contig1019.2 Saccharomyces kudriavzevii Skud_Contig1019.2 N 0.880
9984_YGR159C Saccharomyces bayanus 9984_YGR159C N 0.880
CAGL0E03245g Candida glabrata CAGL0E03245g N 0.880
KLLA0C11495g Kluyveromyces lactis KLLA0C11495g N 0.859
SAKL0H23562g Lachancea kluyveri SAKL0H23562g N 0.852
ZYRO0G07326g Zygosaccharomyces rouxii ZYRO0G07326g N 0.838
A7TNJ0_VANPO Vanderwaltozyma polyspora A7TNJ0_VANPO N 0.838
AFR107W Ashbya gossypii AFR107W N 0.831
KLTH0D03916g Kluyveromyces thermotolerans KLTH0D03916g N 0.810
XP_002493590.1 Pichia pastoris XP_002493590.1 N 0.782
Cd36_00170 Candida dubliniensis Cd36_00170 N 0.725
CTRG_04290 Candida tropicalis CTRG_04290 N 0.718
LELG_01457 Lodderomyces elongisporus LELG_01457 N 0.711
orf19.6090 Candida albicans orf19.6090 N 0.711