XP_002493590.1 (Pichia pastoris)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 XP_002493590.1 T59193_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
XP_002493590.1 RRM 128 198
XP_002493590.1 RRM 231 301

Links

Other RRM family RBPs
Other Pichia pastoris RBPs

21 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
NSR1 Saccharomyces cerevisiae YGR159C N 0.810
Skud_Contig1019.2 Saccharomyces kudriavzevii Skud_Contig1019.2 N 0.810
8944_YGR159C Saccharomyces paradoxus 8944_YGR159C N 0.803
8840_YGR159C Saccharomyces mikatae 8840_YGR159C N 0.803
9984_YGR159C Saccharomyces bayanus 9984_YGR159C N 0.789
LELG_01457 Lodderomyces elongisporus LELG_01457 N 0.789
Scas_Contig621.10 Saccharomyces castellii Scas_Contig621.10 N 0.782
Cd36_00170 Candida dubliniensis Cd36_00170 N 0.782
CTRG_04290 Candida tropicalis CTRG_04290 N 0.782
orf19.6090 Candida albicans orf19.6090 N 0.782
CAGL0E03245g Candida glabrata CAGL0E03245g N 0.775
AFR107W Ashbya gossypii AFR107W N 0.775
SAKL0H23562g Lachancea kluyveri SAKL0H23562g N 0.775
KLTH0D03916g Kluyveromyces thermotolerans KLTH0D03916g N 0.768
ZYRO0G07326g Zygosaccharomyces rouxii ZYRO0G07326g N 0.754
CPAG_01336 Candida parapsilosis CPAG_01336 N 0.754
DEHA0A13563g Debaryomyces hansenii DEHA0A13563g N 0.754
KLLA0C11495g Kluyveromyces lactis KLLA0C11495g N 0.746
e_gwh1.1.1.1022.1 Pichia stipitis e_gwh1.1.1.1022.1 N 0.746
A7TNJ0_VANPO Vanderwaltozyma polyspora A7TNJ0_VANPO N 0.732
CLUG_03443 Candida lusitaniae CLUG_03443 N 0.718