CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AB02851.1
(
Alternaria brassicicola
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
AB02851.1
T55395_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AB02851.1
RRM
223
293
LFVGNMSWNIDEDWLRREFEGFGEIVGCRVITDRETGRAKGFGYVEFANAADAAKAQKEMHEYELDGRQLN
AB02851.1
RRM
324
394
LFLGNVSFECSNESIQEVFQEYGNITRVSLPTDRDTGSLKGFGYVDFSSQDEATAALEALNGQDIGGRAIR
Links
Other
RRM
family RBPs
Other
Alternaria brassicicola
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PTRG_07929
Pyrenophora tritici repentis
PTRG_07929
N
0.972
EAT77472.1
Phaeosphaeria nodorum
EAT77472.1
N
0.859
SNOG_15247
Stagonospora nodorum
SNOG_15247
N
0.859
fgenesh1_pg.C_scaffold_3000314
Cochliobolus heterostrophus C5
fgenesh1_pg.C_scaffold_3000314
N
0.852