pasa_Sanger_mRNA18521 (Chlamydomonas reinhardtii)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 pasa_Sanger_mRNA18521 T53873_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
pasa_Sanger_mRNA18521 RRM 61 131

Links

Other RRM family RBPs
Other Chlamydomonas reinhardtii RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1.C_30147 Volvox carteri estExt_Genewise1.C_30147 N 0.972
SPPG_03010 Spizellomyces punctatus SPPG_03010 I 0.732
s_467614 Phytophthora sojae s_467614 N 0.718
XP_002167334.1 Hydra magnipapillata XP_002167334.1 I 0.718
fgenesh1_pg.C_scaffold_23000018 Phytophthora capsici fgenesh1_pg.C_scaffold_23000018 N 0.718
estExt_fgenesh2_pg.C_7640002 Branchiostoma floridae estExt_fgenesh2_pg.C_7640002 I 0.704
PITG_12876 Phytophthora infestans PITG_12876 N 0.704
estExt_fgenesh2_pg.C_360096 Branchiostoma floridae estExt_fgenesh2_pg.C_360096 I 0.704