CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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GSTUMT00005871001
(
Tuber melanosporum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
GSTUMT00005871001
T56939_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSTUMT00005871001
RRM
102
172
LFLSRLNYNVKEPDLEREFGRFGPIERIRIVRDKETGKHRGYAFIVYEREKDMKAAYKETDGIRIKDRRVL
Links
Other
RRM
family RBPs
Other
Tuber melanosporum
RBPs
9 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
CIMG_09358
Coccidioides immitis
CIMG_09358
N
0.713
CPSG_03908
Coccidioides posadasii
CPSG_03908
N
0.713
AFLA_094660
Aspergillus flavus
CADAFLAG00009151
N
0.704
AO090120000497
Aspergillus oryzae
CADAORAG00011610
N
0.704
TERG_08496
Trichophyton rubrum
TERG_08496
N
0.700
MGYG_07680
Microsporum gypseum
MGYG_07680
N
0.700
MCYG_03975
Microsporum canis
MCYG_03975
N
0.700
PMAA_033920
Penicillium marneffei
PMAA_033920
N
0.700
TEQG_03381
Trichophyton equinum
TEQG_03381
N
0.700