LjT23J20.40.nc (Lotus japonicus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 LjT23J20.40.nc T57280_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LjT23J20.40.nc RRM 4 73
LjT23J20.40.nc RRM 310 383
LjT23J20.40.nc RRM 508 572
LjT23J20.40.nc RRM 628 703
LjT23J20.40.nc RRM 728 796

Links

Other RRM family RBPs
Other Lotus japonicus RBPs

5 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LjT23J20.20.nc Lotus japonicus LjT23J20.20.nc N 0.831
Glyma13g09970.1 Glycine max Glyma13g09970.1 N 0.769
Cucsa.107130 Cucumis sativus Cucsa.107130 N 0.718
cassava28560.m1 Manihot esculenta cassava28560.m1 N 0.718
PK01923.1 Cannabis sativa PK01923.1 N 0.702