MDP0000159547 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000159547 T57364_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000159547 RRM 234 277
MDP0000159547 RRM 408 478
MDP0000159547 RRM 600 655

Links

Other RRM family RBPs
Other Malus x domestica RBPs

12 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ppa002854m Prunus persica ppa002854m N 0.822
Glyma06g15370.1 Glycine max Glyma06g15370.1 N 0.802
Cucsa.101320 Cucumis sativus Cucsa.101320 N 0.802
PK20903.1 Cannabis sativa PK20903.1 N 0.797
Glyma08g15370.1 Glycine max Glyma08g15370.1 N 0.787
Glyma05g32080.1 Glycine max Glyma05g32080.1 N 0.777
Medtr4g141620 Medicago truncatula Medtr4g141620 N 0.777
GSVIVG00022281001 Vitis vinifera GSVIVG00022281001 N 0.756
XM_002873382.1 Arabidopsis lyrata Al_scaffold_0006_891 N 0.747
B9H6Q0_POPTR Populus trichocarpa POPTR_0005s19200 N 0.737
AT5G09880 Arabidopsis thaliana AT5G09880-TAIR-G N 0.732
PDK_20s1549391g001 Phoenix dactylifera PDK_20s1549391g001 N 0.703