ppa002854m (Prunus persica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ppa002854m T58335_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ppa002854m RRM 261 330
ppa002854m RRM 363 433
ppa002854m RRM 558 613

Links

Other RRM family RBPs
Other Prunus persica RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK20903.1 Cannabis sativa PK20903.1 N 0.949
Cucsa.101320 Cucumis sativus Cucsa.101320 N 0.924
Glyma06g15370.1 Glycine max Glyma06g15370.1 N 0.919
Glyma08g15370.1 Glycine max Glyma08g15370.1 N 0.904
Glyma05g32080.1 Glycine max Glyma05g32080.1 N 0.904
Medtr4g141620 Medicago truncatula Medtr4g141620 N 0.893
GSVIVG00022281001 Vitis vinifera GSVIVG00022281001 N 0.868
AT5G09880 Arabidopsis thaliana AT5G09880-TAIR-G N 0.848
XM_002873382.1 Arabidopsis lyrata Al_scaffold_0006_891 N 0.848
B9H6Q0_POPTR Populus trichocarpa POPTR_0005s19200 N 0.838
MDP0000159547 Malus x domestica MDP0000159547 N 0.822
PDK_20s1549391g001 Phoenix dactylifera PDK_20s1549391g001 N 0.802
LOC_Os03g05830 Oryza sativa LOC_Os03g05830 N 0.797
GSVIVG00023998001 Vitis vinifera GSVIVG00023998001 N 0.787
BRADI1G74820 Brachypodium distachyon BRADI1G74820 N 0.787
AC233901.1_FG001 Zea mays AC233901.1_FG001 N 0.787
SB01G046740 Sorghum bicolor Sb01g046740 N 0.787
Glyma10g42890.1 Glycine max Glyma10g42890.1 N 0.777
GRMZM2G071589 Zea mays GRMZM2G071589 N 0.777
SB01G021020 Sorghum bicolor Sb01g021020 N 0.777
GRMZM2G076597 Zea mays GRMZM2G076597 N 0.772
BRADI3G27480 Brachypodium distachyon BRADI3G27480 N 0.766
Glyma20g24130.1 Glycine max Glyma20g24130.1 N 0.766
MDP0000319817 Malus x domestica MDP0000319817 N 0.761
cassava37705.valid.m1 Manihot esculenta cassava37705.valid.m1 N 0.751
Cucsa.370400 Cucumis sativus Cucsa.370400 N 0.751
30183.m001297 Ricinus communis 30183.m001297 N 0.751
XM_002886041.1 Arabidopsis lyrata fgenesh2_kg.3__3274__AT2G16940.1 N 0.741
mgf012385m Mimulus guttatus mgf012385m N 0.736
ppa003064m Prunus persica ppa003064m N 0.736
PK01525.1 Cannabis sativa PK01525.1 N 0.731
AT2G16940 Arabidopsis thaliana AT2G16940-TAIR-G N 0.729
PDK_20s1322741g003 Phoenix dactylifera PDK_20s1322741g003 N 0.706