CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
MDP0000207573
(
Malus x domestica
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
MDP0000207573
T57432_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000207573
RRM
1221
1289
LFVGNLNFRIEEHDVRNFFKDAGEVVDVRFASDPEGKFKGFGHVEFATAEEAKKALEFNGSELLGRDVR
MDP0000207573
RRM
1323
1396
IFIRGFDSSLGEDEIRSSLQEVFSSCGEITRVSIPKDYETGASKGMAYMDFTDADSFTKALGLDGSEFGDSYLK
Links
Other
RRM
family RBPs
Other
Malus x domestica
RBPs
4 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MDP0000277459
Malus x domestica
MDP0000277459
N
0.860
MDP0000472818
Malus x domestica
MDP0000472818
N
0.853
MDP0000322270
Malus x domestica
MDP0000322270
N
0.853
ppa007807m
Prunus persica
ppa007807m
N
0.713