CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ppa007807m
(
Prunus persica
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ppa007807m
T58391_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ppa007807m
RRM
96
164
LFVGNLSFNVERADVENFFKDAGEIVDVRFTTTEDGVFRGFGHVEFATSEAAQKALELNGVELLGRGVR
ppa007807m
RRM
195
268
IFIRGFDTSQGEDEIRSSLQEFFGGCGEITRLSIPKDYETQAPKGMAYLEFQDGDSFKKALQLNQSDFGNGPLT
Links
Other
RRM
family RBPs
Other
Prunus persica
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
MDP0000207573
Malus x domestica
MDP0000207573
N
0.713
A9PEY6_POPTR
Populus trichocarpa
POPTR_0007s07800
N
0.713