CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
Minc08359
(
Meloidogyne incognita
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
Minc08359
T57818_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc08359
RRM
95
158
LFVGNLSTEFKEQDLKELFLPYGEISECYISGKGFAFLRLDTRAHAEAAKEALDTKMVKGRQIR
Minc08359
RRM
168
232
IKVKELSPAVSNELLYLTFSAFGDVERAVHIVDEKGRPTGEGIIEFERKLSAQDAVTQIRERVFL
Links
Other
RRM
family RBPs
Other
Meloidogyne incognita
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Bm1_47275
Brugia malayi
Bm1_47275
N
0.733
WUBG_04674
Wuchereria bancrofti
WUBG_04674
N
0.733
LOAG_01506
Loa loa
LOAG_01506
N
0.733
CRE04498
Caenorhabditis remanei
CRE04498
N
0.725
CBG09034
Caenorhabditis briggsae
CBG09034
N
0.725
CBN08804
Caenorhabditis brenneri
CBN08804
N
0.725
psf-1
Caenorhabditis elegans
F25B5.7
N
0.723