PDK_20s1322741g003 (Phoenix dactylifera)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PDK_20s1322741g003 T58058_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1322741g003 RRM 48 121
PDK_20s1322741g003 RRM 150 220
PDK_20s1322741g003 RRM 263 304

Links

Other RRM family RBPs
Other Phoenix dactylifera RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PDK_20s1549391g001 Phoenix dactylifera PDK_20s1549391g001 N 0.796
Glyma08g15370.1 Glycine max Glyma08g15370.1 N 0.726
XM_002873382.1 Arabidopsis lyrata Al_scaffold_0006_891 N 0.713
Glyma06g15370.1 Glycine max Glyma06g15370.1 N 0.711
AT5G09880 Arabidopsis thaliana AT5G09880-TAIR-G N 0.708
GSVIVG00022281001 Vitis vinifera GSVIVG00022281001 N 0.706
ppa002854m Prunus persica ppa002854m N 0.706
PK20903.1 Cannabis sativa PK20903.1 N 0.701
Glyma05g32080.1 Glycine max Glyma05g32080.1 N 0.701
Cucsa.101320 Cucumis sativus Cucsa.101320 N 0.701