CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TP01_0238
(
Theileria parva
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
TP01_0238
T58776_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TP01_0238
RRM
41
111
IFIGGLDHRMTEGDIIIVFSQFGEPIDINLKRDKDTGKSLGYCFLGYKDQRSTILAVDNFNGSTLLGRRIR
Links
Other
RRM
family RBPs
Other
Theileria parva
RBPs
14 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TA19570
Theileria annulata
TA19570
N
1.000
EDO06867.1
Babesia bovis
EDO06867.1
N
0.887
estExt_fgenesh1_pg.C_410012
Monosiga brevicollis
estExt_fgenesh1_pg.C_410012
N
0.746
PVX_095260
Plasmodium vivax
PVX_095260
N
0.746
PKH_082150
Plasmodium knowlesi
PKH_082150
N
0.746
PCHAS_080610
Plasmodium chabaudi
PCHAS_080610
N
0.746
PBANKA_080580
Plasmodium berghei
PBANKA_080580
N
0.746
PFC0865w
Plasmodium falciparum
PFC0865w
N
0.732
Aqu1.228439
Amphimedon queenslandica
Aqu1.228439
N
0.718
PHUM617480
Pediculus humanus
PHUM617480
N
0.704
NCLIV_024340
Neospora caninum
NCLIV_024340
N
0.704
gw1.1.2244.1
Trichoplax adhaerens
gw1.1.2244.1
N
0.704
nasonia_NCBI_hmm382923
Nasonia vitripennis
nasonia_NCBI_hmm382923
N
0.704
Aqu1.200557
Amphimedon queenslandica
Aqu1.200557
N
0.704