YALI0C13860g (Yarrowia lipolytica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 YALI0C13860g T59318_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
YALI0C13860g RRM 1 69
YALI0C13860g RRM 85 154

Links

Other RRM family RBPs
Other Yarrowia lipolytica RBPs

18 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
HCAG_03640 Histoplasma capsulatum HCAG_03640 N 0.748
BDBG_05401 Blastomyces dermatitidis BDBG_05401 N 0.741
AO090001000725 Aspergillus oryzae CADAORAG00000662 N 0.734
An02g14690 Aspergillus niger CADANGAG00002994 N 0.734
ANIA_10941 Aspergillus nidulans CADANIAG00000536 N 0.734
AFLA_130230 Aspergillus flavus CADAFLAG00010081 N 0.734
UREG_00938 Uncinocarpus reesii UREG_00938 N 0.734
CIMG_00990 Coccidioides immitis CIMG_00990 N 0.734
CPSG_02224 Coccidioides posadasii CPSG_02224 N 0.734
ATEG_06805 Aspergillus terreus CADATEAG00006229 N 0.727
fgenesh1_pg.00082_#_116 Aspergillus carbonarius fgenesh1_pg.00082_#_116 N 0.727
Pc22g08010 Penicillium chrysogenum Pc22g08010 N 0.719
PMAA_028640 Penicillium marneffei PMAA_028640 N 0.712
GSTUMT00005496001 Tuber melanosporum GSTUMT00005496001 N 0.712
BC1G_12993 Botrytis cinerea BC1G_12993 N 0.705
ARB_05069 Arthroderma benhamiae ARB_05069 N 0.705
MCYG_04652 Microsporum canis MCYG_04652 N 0.705
TERG_03265 Trichophyton rubrum TERG_03265 N 0.705