CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ATEG_06805
(
Aspergillus terreus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CADATEAG00006229
T33759_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADATEAP00006229
RRM
1
69
MFIGGLNWETTDQSLKDYFSQFGEVQECTVMRDSATGRSRGFGFLTFRDPKTVNTVMVKEHYLDGKIID
CADATEAP00006229
RRM
85
153
IFVGGVSQEANEQDFKSFFMQFGRVVDATLMIDKDTGRPRGFGFVTFDSEAAVEAALSRPLEILGKPIE
Links
Other
RRM
family RBPs
Other
Aspergillus terreus
RBPs
53 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AO090001000725
Aspergillus oryzae
CADAORAG00000662
N
0.993
AFLA_130230
Aspergillus flavus
CADAFLAG00010081
N
0.993
An02g14690
Aspergillus niger
CADANGAG00002994
N
0.957
CPSG_02224
Coccidioides posadasii
CPSG_02224
N
0.957
ANIA_10941
Aspergillus nidulans
CADANIAG00000536
N
0.957
CIMG_00990
Coccidioides immitis
CIMG_00990
N
0.957
fgenesh1_pg.00082_#_116
Aspergillus carbonarius
fgenesh1_pg.00082_#_116
N
0.949
BDBG_05401
Blastomyces dermatitidis
BDBG_05401
N
0.949
UREG_00938
Uncinocarpus reesii
UREG_00938
N
0.942
PMAA_028640
Penicillium marneffei
PMAA_028640
N
0.942
HCAG_03640
Histoplasma capsulatum
HCAG_03640
N
0.942
Pc22g08010
Penicillium chrysogenum
Pc22g08010
N
0.935
ACLA_068230
Aspergillus clavatus
CADACLAG00007015
N
0.899
NFIA_082870
Neosartorya fischeri
CADNFIAG00006872
N
0.891
ARB_05069
Arthroderma benhamiae
ARB_05069
N
0.884
MCYG_04652
Microsporum canis
MCYG_04652
N
0.884
AFUA_2G06090
Aspergillus fumigatus
CADAFUAG00003703
N
0.884
TERG_03265
Trichophyton rubrum
TERG_03265
N
0.884
TEQG_02438
Trichophyton equinum
TEQG_02438
N
0.870
SS1G_05220
Sclerotinia sclerotiorum
SS1G_05220
N
0.862
GLRG_03331
Colletotrichum graminicola
GLRG_03331
N
0.855
BC1G_12993
Botrytis cinerea
BC1G_12993
N
0.855
estExt_fgenesh1_pg.C_10265
Neurospora tetrasperma
estExt_fgenesh1_pg.C_10265
N
0.848
NCU12158
Neurospora crassa
NCU12158
N
0.848
TRV_06675
Trichophyton verrucosum
TRV_06675
N
0.848
MGG_06881
Magnaporthe oryzae
MGG_06881
N
0.848
estExt_fgenesh3_pm.C_10926
Neurospora discreta
estExt_fgenesh3_pm.C_10926
N
0.848
CHGG_07099
Chaetomium globosum
CHGG_07099
N
0.841
Pa_2_12560
Podospora anserina
Pa_2_12560
N
0.841
estExt_Genewise1.C_23240
Thielavia terrestris
estExt_Genewise1.C_23240
N
0.841
estExt_Genewise1Plus.C_240153
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_240153
N
0.841
gw1.3.2310.1
Myceliophthora thermophila
gw1.3.2310.1
N
0.841
GSTUMT00005496001
Tuber melanosporum
GSTUMT00005496001
N
0.835
estExt_Genewise1Plus.C_70091
Cryphonectria parasitica
estExt_Genewise1Plus.C_70091
N
0.826
AB01113.1
Alternaria brassicicola
AB01113.1
N
0.826
FOXG_05191
Fusarium oxysporum
FOXG_05191
N
0.826
FVEG_02942
Fusarium verticillioides
FVEG_02942
N
0.826
VDBG_00519
Verticillium albo atrum
VDBG_00519
N
0.819
e_gw1.5.1166.1
Nectria haematococca
e_gw1.5.1166.1
N
0.819
estExt_GeneWisePlus.C_210250
Trichoderma reesei
estExt_GeneWisePlus.C_210250
N
0.819
FGSG_13728
Fusarium graminearum
FGSG_13728
N
0.819
estExt_fgenesh1_pg.C_40107
Trichoderma atroviride
estExt_fgenesh1_pg.C_40107
N
0.812
estExt_Genewise1Plus.C_230018
Trichoderma virens
estExt_Genewise1Plus.C_230018
N
0.804
gw1.6.1353.1
Mycosphaerella graminicola
gw1.6.1353.1
N
0.784
EAT82933.2
Phaeosphaeria nodorum
EAT82933.2
N
0.783
estExt_Genewise1Plus.C_500038
Mycosphaerella fijiensis
estExt_Genewise1Plus.C_500038
N
0.764
TESG_02793
Trichophyton tonsurans
TESG_02793
N
0.761
MGYG_08958
Microsporum gypseum
MGYG_08958
N
0.754
SJAG_03853
Schizosaccharomyces japonicus
SJAG_03853
N
0.741
SPBC660.15
Schizosaccharomyces pombe
SPBC660.15
N
0.734
SPOG_01457
Schizosaccharomyces cryophilus
SPOG_01457
N
0.734
YALI0C13860g
Yarrowia lipolytica
YALI0C13860g
N
0.727
SOCG_02545
Schizosaccharomyces octosporus
SOCG_02545
N
0.727