CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ENSEEUG00000007416
(
Erinaceus europaeus
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
ENSEEUG00000007416
T60341_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSEEUP00000006750
S1
92
161
XXXVGLFTEIGPMSCFISRHSIPSEMEFDPNSNPPCYKTMDEDIVIQQEDEIRLKIVGTRVDKNDIFAIG
Links
Other
S1
family RBPs
Other
Erinaceus europaeus
RBPs
36 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
POLR2G
Ochotona princeps
ENSOPRG00000014769
N
0.986
POLR2G
Spermophilus tridecemlineatus
ENSSTOG00000004391
N
0.986
POLR2G
Echinops telfairi
ENSETEG00000019637
N
0.957
POLR2G
Tursiops truncatus
ENSTTRG00000002478
N
0.786
Polr2g
Rattus norvegicus
ENSRNOG00000019439
N
0.786
POLR2G
Pan troglodytes
ENSPTRG00000003786
N
0.786
Ame_R013924
Ailuropoda melanoleuca
Ame_R013924
N
0.786
POLR2G
Cavia porcellus
ENSCPOG00000001153
N
0.786
LOC100063883
Equus caballus
ENSECAG00000021465
N
0.786
LOC100398629
Callithrix jacchus
ENSCJAG00000018688
N
0.786
POLR2G
Canis familiaris
ENSCAFG00000015461
N
0.786
RPB7_BOVIN
Bos taurus
ENSBTAG00000009483
N
0.786
POLR2G
Oryctolagus cuniculus
ENSOCUG00000009485
N
0.786
ENSPPYG00000003147
Pongo pygmaeus
ENSPPYG00000003147
N
0.786
POLR2G
Macaca mulatta
ENSMMUG00000014368
N
0.786
Polr2g
Mus musculus
ENSMUSG00000071662
N
0.786
POLR2G
Homo sapiens
ENSG00000168002
N
0.786
POLR2G
Gorilla gorilla
ENSGGOG00000011739
N
0.786
Polr2g
Dipodomys ordii
ENSDORG00000015696
N
0.774
POLR2G
Gasterosteus aculeatus
ENSGACG00000017706
N
0.774
POLR2G
Loxodonta africana
ENSLAFG00000004354
N
0.774
POLR2G
Macropus eugenii
ENSMEUG00000011547
N
0.774
POLR2G
Ornithorhynchus anatinus
ENSOANG00000005808
N
0.774
POLR2G
Takifugu rubripes
ENSTRUG00000002492
N
0.774
POLR2G
Monodelphis domestica
ENSMODG00000007984
N
0.774
POLR2G
Procavia capensis
ENSPCAG00000016408
N
0.774
ENSMLUG00000003971
Myotis lucifugus
ENSMLUG00000003971
N
0.774
POLR2G
Pteropus vampyrus
ENSPVAG00000003481
N
0.774
ENSMLUG00000011039
Myotis lucifugus
ENSMLUG00000011039
N
0.774
POLR2G
Oryzias latipes
ENSORLG00000003154
N
0.774
polr2gl
Danio rerio
ENSDARG00000056127
N
0.762
POLR2G
Vicugna pacos
ENSVPAG00000009534
N
0.762
polr2g
Xenopus tropicalis
ENSXETG00000006022
N
0.762
AAI28969
Xenopus laevis
AAI28969
N
0.762
POLR2G
Anolis carolinensis
ENSACAG00000001005
N
0.762
POLR2G
Microcebus murinus
ENSMICG00000009967
N
0.759