CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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POLR2G
(
Microcebus murinus
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
ENSMICG00000009967
T60419_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMICP00000009073
S1
49
129
RPFKGEVVDAVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFDPNSNPPCYKTVDEVIQQDDEIRLKIVGTRVDKNDIFAIG
Links
Other
S1
family RBPs
Other
Microcebus murinus
RBPs
65 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAI28969
Xenopus laevis
AAI28969
N
0.964
POLR2G
Loxodonta africana
ENSLAFG00000004354
N
0.964
POLR2G
Procavia capensis
ENSPCAG00000016408
N
0.964
polr2g
Xenopus tropicalis
ENSXETG00000006022
N
0.964
POLR2G
Gasterosteus aculeatus
ENSGACG00000017706
N
0.964
ENSMLUG00000003971
Myotis lucifugus
ENSMLUG00000003971
N
0.964
polr2gl
Danio rerio
ENSDARG00000056127
N
0.964
POLR2G
Oryzias latipes
ENSORLG00000003154
N
0.964
POLR2G
Takifugu rubripes
ENSTRUG00000002492
N
0.964
POLR2G
Ornithorhynchus anatinus
ENSOANG00000005808
N
0.964
POLR2G
Macropus eugenii
ENSMEUG00000011547
N
0.964
POLR2G
Monodelphis domestica
ENSMODG00000007984
N
0.964
ENSMLUG00000011039
Myotis lucifugus
ENSMLUG00000011039
N
0.964
POLR2G
Anolis carolinensis
ENSACAG00000001005
N
0.952
Polr2g
Dipodomys ordii
ENSDORG00000015696
N
0.952
RPB7_BOVIN
Bos taurus
ENSBTAG00000009483
N
0.952
LOC100398629
Callithrix jacchus
ENSCJAG00000018688
N
0.952
Ame_R013924
Ailuropoda melanoleuca
Ame_R013924
N
0.952
POLR2G
Cavia porcellus
ENSCPOG00000001153
N
0.952
LOC100063883
Equus caballus
ENSECAG00000021465
N
0.952
POLR2G
Macaca mulatta
ENSMMUG00000014368
N
0.952
POLR2G
Gorilla gorilla
ENSGGOG00000011739
N
0.952
Polr2g
Rattus norvegicus
ENSRNOG00000019439
N
0.952
POLR2G
Pan troglodytes
ENSPTRG00000003786
N
0.952
ENSPPYG00000003147
Pongo pygmaeus
ENSPPYG00000003147
N
0.952
POLR2G
Homo sapiens
ENSG00000168002
N
0.952
POLR2G
Oryctolagus cuniculus
ENSOCUG00000009485
N
0.952
POLR2G
Tursiops truncatus
ENSTTRG00000002478
N
0.952
POLR2G
Canis familiaris
ENSCAFG00000015461
N
0.952
Polr2g
Mus musculus
ENSMUSG00000071662
N
0.952
POLR2G
Pteropus vampyrus
ENSPVAG00000003481
N
0.940
POLR2G
Vicugna pacos
ENSVPAG00000009534
N
0.917
estExt_fgenesh2_pg.C_1620033
Branchiostoma floridae
estExt_fgenesh2_pg.C_1620033
N
0.881
estExt_gwp.C_3050025
Branchiostoma floridae
estExt_gwp.C_3050025
N
0.881
ENSCING00000004991
Ciona intestinalis
ENSCING00000004991
N
0.881
XP_001176876.1
Strongylocentrotus purpuratus
XP_001176876.1
N
0.869
XP_001175504.1
Strongylocentrotus purpuratus
XP_001175504.1
N
0.869
XP_780458.1
Strongylocentrotus purpuratus
XP_780458.1
N
0.869
XP_001175728.1
Strongylocentrotus purpuratus
XP_001175728.1
N
0.869
XP_002157143.1
Hydra magnipapillata
XP_002157143.1
N
0.857
estExt_Genewise1Plus.C_sca_120103
Lottia gigantea
estExt_Genewise1Plus.C_sca_120103
N
0.845
estExt_Genewise1Plus.C_2200037
Capitella teleta
estExt_Genewise1Plus.C_2200037
N
0.845
PASA_GEN_8000031
Daphnia pulex
PASA_GEN_8000031
N
0.833
ENSCSAVG00000002667
Ciona savignyi
ENSCSAVG00000002667
N
0.833
estExt_fgenesh1_pg.C_1060040
Nematostella vectensis
estExt_fgenesh1_pg.C_1060040
N
0.821
SNAPOd2T00009931001
Oikopleura dioica
SNAPOd2T00009931001
N
0.786
POLR2G
Echinops telfairi
ENSETEG00000019637
N
0.771
POLR2G
Ochotona princeps
ENSOPRG00000014769
N
0.771
LOAG_03448
Loa loa
LOAG_03448
N
0.762
ENSEEUG00000007416
Erinaceus europaeus
ENSEEUG00000007416
N
0.759
CBG04195
Caenorhabditis briggsae
CBG04195
N
0.750
CJA18930
Caenorhabditis japonica
CJA18930
N
0.750
rpb-7
Caenorhabditis elegans
Y54E10BR.6
N
0.750
PHUM079870
Pediculus humanus
PHUM079870
N
0.750
POLR2G
Spermophilus tridecemlineatus
ENSSTOG00000004391
N
0.747
CRE30052
Caenorhabditis remanei
CRE30052
N
0.738
amel4_ncbi_hmm13760
Tribolium castaneum
amel4_ncbi_hmm13760
N
0.738
nasonia_NCBI_hmm304924
Nasonia vitripennis
nasonia_NCBI_hmm304924
N
0.738
CBN18093
Caenorhabditis brenneri
CBN18093
N
0.738
amel4_ncbi_hmm13760
Apis mellifera
amel4_ncbi_hmm13760
N
0.738
CpipJ_CPIJ001219
Culex pipiens
CpipJ_CPIJ001219
N
0.714
CPIJ001219
Culex quinquefasciatus
CPIJ001219
N
0.714
Bm1_48540
Brugia malayi
Bm1_48540
N
0.714
AAEL003401
Aedes aegypti
AAEL003401
N
0.702
Minc17095
Meloidogyne incognita
Minc17095
N
0.702