fgenesh1_pg.C_scaffold_24000012 (Trichoderma virens)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 fgenesh1_pg.C_scaffold_24000012 T61216_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_24000012 S1 226 301

Links

Other S1 family RBPs
Other Trichoderma virens RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pm.C_scaffold_24000056 Trichoderma reesei fgenesh1_pm.C_scaffold_24000056 N 0.934
GLRG_07196 Colletotrichum graminicola GLRG_07196 N 0.776
estExt_fgenesh2_pg.C_30399 Neurospora discreta estExt_fgenesh2_pg.C_30399 N 0.763
NCU06318 Neurospora crassa NCU06318 N 0.750
estExt_fgenesh1_pg.C_40021 Neurospora tetrasperma estExt_fgenesh1_pg.C_40021 N 0.737
ATEG_07640 Aspergillus terreus CADATEAG00000474 N 0.724
SS1G_13866 Sclerotinia sclerotiorum SS1G_13866 N 0.711
Pa_6_9920 Podospora anserina Pa_6_9920 N 0.711
CPSG_07949 Coccidioides posadasii CPSG_07949 N 0.711
NFIA_076400 Neosartorya fischeri CADNFIAG00008573 N 0.711