fgenesh1_pm.C_scaffold_24000056 (Trichoderma reesei)
S1

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00575 (S1) IPR003029 fgenesh1_pm.C_scaffold_24000056 T61225_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.C_scaffold_24000056 S1 223 298

Links

Other S1 family RBPs
Other Trichoderma reesei RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh1_pg.C_scaffold_24000012 Trichoderma virens fgenesh1_pg.C_scaffold_24000012 N 0.934
GLRG_07196 Colletotrichum graminicola GLRG_07196 N 0.789
estExt_fgenesh2_pg.C_30399 Neurospora discreta estExt_fgenesh2_pg.C_30399 N 0.776
NCU06318 Neurospora crassa NCU06318 N 0.763
estExt_fgenesh1_pg.C_40021 Neurospora tetrasperma estExt_fgenesh1_pg.C_40021 N 0.750
Pa_6_9920 Podospora anserina Pa_6_9920 N 0.750
SS1G_13866 Sclerotinia sclerotiorum SS1G_13866 N 0.724
ATEG_07640 Aspergillus terreus CADATEAG00000474 N 0.711