CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PTTG_05588
(
Puccinia triticina
)
YTH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF04146 (YTH)
IPR007275
PTTG_05588
T61891_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTTG_05588T0
YTH
1058
1149
LLFSVNASGHFCGMAEMLTAVDYNTSSKVWAQDKWKGIFKVRWVFVKDIPNNALRHIKLTNTPENKPITSSRDTQEVPHDKGIQVLHIMSSF
Links
Other
YTH
family RBPs
Other
Puccinia triticina
RBPs
3 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PGTG_07186
Puccinia graminis
PGTG_07186
N
0.989
e_gw1.37.103.1
Melampsora laricis populina
e_gw1.37.103.1
N
0.935
AGAP003817
Anopheles gambiae
AGAP003817
N
0.707