e_gw1.37.103.1 (Melampsora laricis populina)
YTH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF04146 (YTH) IPR007275 e_gw1.37.103.1 T62355_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.37.103.1 YTH 82 173

Links

Other YTH family RBPs
Other Melampsora laricis populina RBPs

12 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PTTG_05588 Puccinia triticina PTTG_05588 N 0.935
PGTG_07186 Puccinia graminis PGTG_07186 N 0.924
estExt_fgenesh1_pg.C_60396 Sporobolomyces roseus estExt_fgenesh1_pg.C_60396 N 0.739
gw1.2.1711.1 Schizophyllum commune gw1.2.1711.1 N 0.728
fgenesh3_pg.C_scaffold_2000868 Laccaria bicolor fgenesh3_pg.C_scaffold_2000868 N 0.728
CC1G_01141 Coprinopsis cinerea CC1G_01141 N 0.717
e_gw1.1.1657.1 Pleurotus ostreatus e_gw1.1.1657.1 N 0.717
estExt_fgenesh3_pg.C_830047 Postia placenta estExt_fgenesh3_pg.C_830047 N 0.717
fgenesh1_pg.C_scaffold_1000538 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_1000538 N 0.717
e_gw1.2.841.1 Heterobasidion annosum e_gw1.2.841.1 N 0.717
UM02724 Ustilago maydis UM02724 N 0.710
estExt_fgenesh2_pg.C_120175 Serpula lacrymans estExt_fgenesh2_pg.C_120175 N 0.707