CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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YTHDF1
(
Felis catus
)
YTH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF04146 (YTH)
IPR007275
ENSFCAG00000008917
T62020_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFCAP00000008264
YTH
427
485
LLFSVNGSGHFCGVAEMKSPVDYGTSAGVWSQDKWKGKFDVKWIFVKDVPNNQLRHIRL
Links
Other
YTH
family RBPs
Other
Felis catus
RBPs
5 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Ythdf2
Rattus norvegicus
ENSRNOG00000010892
N
0.779
ENSMODG00000008255
Monodelphis domestica
ENSMODG00000008255
N
0.775
ENSOANG00000005053
Ornithorhynchus anatinus
ENSOANG00000005053
N
0.771
YTHDF3
Callithrix jacchus
ENSCJAG00000009217
N
0.761
ENSMLUG00000006541
Myotis lucifugus
ENSMLUG00000006541
N
0.750