CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
Ythdf2
(
Rattus norvegicus
)
YTH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF04146 (YTH)
IPR007275
ENSRNOG00000010892
T62131_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000014479
YTH
457
524
LLFSVNGSGHFCGVAEMKSAVDYNTCAGVWSQDKWKGRFDVRWIFVKDVPNSQLRHIRLERNEPIPVT
Links
Other
YTH
family RBPs
Other
Rattus norvegicus
RBPs
39 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ENSMODG00000008255
Monodelphis domestica
ENSMODG00000008255
N
0.789
ENSOANG00000005053
Ornithorhynchus anatinus
ENSOANG00000005053
N
0.786
YTHDF1
Felis catus
ENSFCAG00000008917
N
0.779
ENSMLUG00000006541
Myotis lucifugus
ENSMLUG00000006541
N
0.778
YTHDF3
Callithrix jacchus
ENSCJAG00000009217
N
0.775
YTHDF2
Microcebus murinus
ENSMICG00000003729
N
0.714
XR_023164.1
Pan troglodytes
ENSPTRG00000000439
N
0.714
YTHDF2
Pteropus vampyrus
ENSPVAG00000017224
N
0.714
YTHDF2
Meleagris gallopavo
ENSMGAG00000001610
N
0.714
YTHDF2
Loxodonta africana
ENSLAFG00000030451
N
0.714
YTHDF2
Macropus eugenii
ENSMEUG00000016488
N
0.714
YTHDF2
Myotis lucifugus
ENSMLUG00000012606
N
0.714
YTHDF2
Macaca mulatta
ENSMMUG00000011391
N
0.714
YTHDF2
Ochotona princeps
ENSOPRG00000017111
N
0.714
YTHDF2
Oryctolagus cuniculus
ENSOCUG00000010612
N
0.714
Ythdf2
Mus musculus
ENSMUSG00000040025
N
0.714
YTHDF2
Gorilla gorilla
ENSGGOG00000024069
N
0.714
YTHDF2
Procavia capensis
ENSPCAG00000007587
N
0.714
YTHDF2
Monodelphis domestica
ENSMODG00000010973
N
0.714
YTHDF2
Otolemur garnettii
ENSOGAG00000014648
N
0.714
LOC419583
Gallus gallus
ENSGALG00000000959
N
0.714
YTHD2_BOVIN
Bos taurus
ENSBTAG00000015771
N
0.714
YTHDF2
Canis familiaris
ENSCAFG00000011700
N
0.714
YTHDF2
Choloepus hoffmanni
ENSCHOG00000000357
N
0.714
YTHDF2
Anolis carolinensis
ENSACAG00000010846
N
0.714
Ame_R001131
Ailuropoda melanoleuca
Ame_R001131
N
0.714
YTHDF2
Tarsius syrichta
ENSTSYG00000004178
N
0.714
YTHDF2
Tursiops truncatus
ENSTTRG00000013603
N
0.714
YTHDF2
Sorex araneus
ENSSARG00000001187
N
0.714
YTHDF2
Callithrix jacchus
ENSCJAG00000009804
N
0.714
YTHDF2
Echinops telfairi
ENSETEG00000017614
N
0.714
YTHDF2
Felis catus
ENSFCAG00000012446
N
0.714
YTHDF2
Homo sapiens
ENSG00000198492
N
0.714
YTHDF2
Cavia porcellus
ENSCPOG00000019907
N
0.714
YTHDF2
Erinaceus europaeus
ENSEEUG00000011398
N
0.714
Ythdf2
Dipodomys ordii
ENSDORG00000016564
N
0.714
LOC100070667
Equus caballus
ENSECAG00000023108
N
0.714
YTHDF2
Taeniopygia guttata
ENSTGUG00000017347
N
0.703
YTHDF2
Ornithorhynchus anatinus
ENSOANG00000006124
N
0.703