XP_001201949.1 (Strongylocentrotus purpuratus)
CCCH ZF,CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00098 (zf-CCHC) 		IPR000571
IPR001878 		XP_001201949.1 T00143_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
XP_001201949.1 CCCH ZF 9 33
XP_001201949.1 CCCH ZF 35 60
XP_001201949.1 CCCH ZF 63 88
XP_001201949.1 CCCH ZF 91 111
XP_001201949.1 CCCH ZF 116 140
XP_001201949.1 CCHC ZF 159 175
XP_001201949.1 CCHC ZF 246 263

Links

Other CCCH ZF,CCHC ZF family RBPs
Other Strongylocentrotus purpuratus RBPs

5 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_fgenesh2_pg.C_1120028 Branchiostoma floridae estExt_fgenesh2_pg.C_1120028 N 0.713
estExt_fgenesh2_pg.C_170094 Branchiostoma floridae estExt_fgenesh2_pg.C_170094 N 0.713
e_gw1.98.132.1 Lottia gigantea e_gw1.98.132.1 N 0.706
ISCW021476 Ixodes scapularis ISCW021476 N 0.704
XP_001189328.1 Strongylocentrotus purpuratus XP_001189328.1 N 1.000