ISCW021476 (Ixodes scapularis)
CCCH ZF,CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00098 (zf-CCHC) 		IPR000571
IPR001878 		ISCW021476 T00098_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ISCW021476-PA CCCH ZF 36 61
ISCW021476-PA CCCH ZF 63 88
ISCW021476-PA CCCH ZF 91 116
ISCW021476-PA CCCH ZF 120 140
ISCW021476-PA CCCH ZF 143 168
ISCW021476-PA CCHC ZF 185 202
ISCW021476-PA CCHC ZF 248 265

Links

Other CCCH ZF,CCHC ZF family RBPs
Other Ixodes scapularis RBPs

13 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
amel4_ncbi_hmm9262 Apis mellifera amel4_ncbi_hmm9262 N 0.791
amel4_ncbi_hmm9262 Tribolium castaneum amel4_ncbi_hmm9262 N 0.791
estExt_fgenesh2_pg.C_170094 Branchiostoma floridae estExt_fgenesh2_pg.C_170094 N 0.765
estExt_fgenesh2_pg.C_1120028 Branchiostoma floridae estExt_fgenesh2_pg.C_1120028 N 0.765
AGAP013044 Anopheles gambiae AGAP013044 N 0.747
GA17582-RA Drosophila pseudoobscura FBgn0077593 N 0.746
Clp Drosophila melanogaster FBgn0015621 N 0.740
e_gw1.98.132.1 Lottia gigantea e_gw1.98.132.1 N 0.735
DGIL_AUG5s6088g2t1 Acyrtosiphon pisum DGIL_AUG5s6088g2t1 N 0.733
estExt_Genewise1Plus.C_470172 Capitella teleta estExt_Genewise1Plus.C_470172 N 0.728
e_gw1.24.75.1 Daphnia pulex e_gw1.24.75.1 N 0.718
XP_001201949.1 Strongylocentrotus purpuratus XP_001201949.1 N 0.704
XP_001189328.1 Strongylocentrotus purpuratus XP_001189328.1 N 0.704