e_gw1.98.132.1 (Lottia gigantea)
CCCH ZF,CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00098 (zf-CCHC) 		IPR000571
IPR001878 		e_gw1.98.132.1 T00114_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.98.132.1 CCCH ZF 39 61
e_gw1.98.132.1 CCCH ZF 63 88
e_gw1.98.132.1 CCCH ZF 91 116
e_gw1.98.132.1 CCCH ZF 119 139
e_gw1.98.132.1 CCCH ZF 143 168
e_gw1.98.132.1 CCHC ZF 185 202
e_gw1.98.132.1 CCHC ZF 242 259

Links

Other CCCH ZF,CCHC ZF family RBPs
Other Lottia gigantea RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
estExt_Genewise1Plus.C_470172 Capitella teleta estExt_Genewise1Plus.C_470172 N 0.758
amel4_ncbi_hmm9262 Tribolium castaneum amel4_ncbi_hmm9262 N 0.752
amel4_ncbi_hmm9262 Apis mellifera amel4_ncbi_hmm9262 N 0.752
ISCW021476 Ixodes scapularis ISCW021476 N 0.735
DGIL_AUG5s6088g2t1 Acyrtosiphon pisum DGIL_AUG5s6088g2t1 N 0.722
AGAP013044 Anopheles gambiae AGAP013044 N 0.712
estExt_fgenesh2_pg.C_1120028 Branchiostoma floridae estExt_fgenesh2_pg.C_1120028 N 0.708
estExt_fgenesh2_pg.C_170094 Branchiostoma floridae estExt_fgenesh2_pg.C_170094 N 0.708
XP_001201949.1 Strongylocentrotus purpuratus XP_001201949.1 N 0.706
XP_001189328.1 Strongylocentrotus purpuratus XP_001189328.1 N 0.706