RBM22 (Oryzias latipes)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		ENSORLG00000004975 T00588_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000006274 CCCH ZF 163 185
ENSORLP00000006274 RRM 234 299

Links

Other CCCH ZF,RRM family RBPs
Other Oryzias latipes RBPs

48 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL011251 Aedes aegypti AAEL011251 N 0.000
AGAP004509 Anopheles gambiae AGAP004509 N 0.000
amel4_ncbi_hmm34588 Apis mellifera amel4_ncbi_hmm34588 N 0.753
CPIJ014747 Culex quinquefasciatus CPIJ014747 N 0.000
estExt_Genewise1Plus.C_940087 Daphnia pulex estExt_Genewise1Plus.C_940087 N 0.000
e_gw1.462.21.1 Capitella teleta e_gw1.462.21.1 N 0.700
CG14641 Drosophila melanogaster FBgn0037220 N 0.000
GA13140-RA Drosophila pseudoobscura FBgn0073177 N 0.000
GF17279 Drosophila ananassae FBgn0094297 N 0.000
GG11763 Drosophila erecta FBgn0104058 N 0.000
GH21879 Drosophila grimshawi FBgn0129340 N 0.000
GI21935 Drosophila mojavensis FBgn0144664 N 0.000
GL12337 Drosophila persimilis FBgn0149944 N 0.000
GM10722 Drosophila sechellia FBgn0165668 N 0.000
GD19696 Drosophila simulans FBgn0191187 N 0.000
GJ14294 Drosophila virilis FBgn0201509 N 0.000
GK11018 Drosophila willistoni FBgn0213029 N 0.000
GE25369 Drosophila yakuba FBgn0242446 N 0.000
ISCW021094 Ixodes scapularis ISCW021094 N 0.719
nasonia_NCBI_hmm370054 Nasonia vitripennis nasonia_NCBI_hmm370054 N 0.000