estExt_Genewise1Plus.C_940087 (Daphnia pulex)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		estExt_Genewise1Plus.C_940087 T00925_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_Genewise1Plus.C_940087 CCCH ZF 166 187
estExt_Genewise1Plus.C_940087 RRM 236 301

Links

Other CCCH ZF,RRM family RBPs
Other Daphnia pulex RBPs

25 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
nasonia_NCBI_hmm370054 Nasonia vitripennis nasonia_NCBI_hmm370054 N 0.775
amel4_ncbi_hmm34588 Apis mellifera amel4_ncbi_hmm34588 N 0.775
ISCW021094 Ixodes scapularis ISCW021094 N 0.753
GM10722 Drosophila sechellia FBgn0165668 N 0.742
CG14641 Drosophila melanogaster FBgn0037220 N 0.742
GA13140-RA Drosophila pseudoobscura FBgn0073177 N 0.742
GD19696 Drosophila simulans FBgn0191187 N 0.742
GG11763 Drosophila erecta FBgn0104058 N 0.742
GL12337 Drosophila persimilis FBgn0149944 N 0.742
gw.38.22.1 Branchiostoma floridae gw.38.22.1 N 0.742
GE25369 Drosophila yakuba FBgn0242446 N 0.742
estExt_fgenesh2_pm.C_1790010 Branchiostoma floridae estExt_fgenesh2_pm.C_1790010 N 0.742
GK11018 Drosophila willistoni FBgn0213029 N 0.730
PHUM268310 Pediculus humanus PHUM268310 N 0.730
GI21935 Drosophila mojavensis FBgn0144664 N 0.730
GF17279 Drosophila ananassae FBgn0094297 N 0.730
GH21879 Drosophila grimshawi FBgn0129340 N 0.730
RBM22 Danio rerio ENSDARG00000010238 N 0.730
GJ14294 Drosophila virilis FBgn0201509 N 0.719
CpipJ_CPIJ014747 Culex pipiens CpipJ_CPIJ014747 N 0.716
CPIJ014747 Culex quinquefasciatus CPIJ014747 N 0.716
RBM22 Gasterosteus aculeatus ENSGACG00000018027 N 0.708
AAEL011251 Aedes aegypti AAEL011251 N 0.705
AGAP004509 Anopheles gambiae AGAP004509 N 0.705
rbm22 Xenopus tropicalis ENSXETG00000020435 N 0.700