amel4_ncbi_hmm34588 (Apis mellifera)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		amel4_ncbi_hmm34588 T00358_0.6 DroSpeGe (2008-Jul-18)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
amel4_ncbi_hmm34588 CCCH ZF 163 185
amel4_ncbi_hmm34588 RRM 234 299

Links

Other CCCH ZF,RRM family RBPs
Other Apis mellifera RBPs

63 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
nasonia_NCBI_hmm370054 Nasonia vitripennis nasonia_NCBI_hmm370054 N 0.876
gw.38.22.1 Branchiostoma floridae gw.38.22.1 N 0.820
estExt_fgenesh2_pm.C_1790010 Branchiostoma floridae estExt_fgenesh2_pm.C_1790010 N 0.820
PHUM268310 Pediculus humanus PHUM268310 N 0.809
ISCW021094 Ixodes scapularis ISCW021094 N 0.798
CPIJ014747 Culex quinquefasciatus CPIJ014747 N 0.787
CpipJ_CPIJ014747 Culex pipiens CpipJ_CPIJ014747 N 0.787
AAEL011251 Aedes aegypti AAEL011251 N 0.787
AGAP004509 Anopheles gambiae AGAP004509 N 0.775
estExt_Genewise1Plus.C_940087 Daphnia pulex estExt_Genewise1Plus.C_940087 N 0.775
GL12337 Drosophila persimilis FBgn0149944 N 0.764
GA13140-RA Drosophila pseudoobscura FBgn0073177 N 0.764
Rbm22 Rattus norvegicus ENSRNOG00000019235 N 0.756
GF17279 Drosophila ananassae FBgn0094297 N 0.753
GG11763 Drosophila erecta FBgn0104058 N 0.753
CG14641 Drosophila melanogaster FBgn0037220 N 0.753
GE25369 Drosophila yakuba FBgn0242446 N 0.753
GJ14294 Drosophila virilis FBgn0201509 N 0.753
GD19696 Drosophila simulans FBgn0191187 N 0.753
GM10722 Drosophila sechellia FBgn0165668 N 0.753
GH21879 Drosophila grimshawi FBgn0129340 N 0.753
RBM22 Oryzias latipes ENSORLG00000004975 N 0.753
ENSCHOG00000004192 Choloepus hoffmanni ENSCHOG00000004192 N 0.744
RBM22_CHICK Gallus gallus ENSGALG00000004555 N 0.744
RBM22 Tursiops truncatus ENSTTRG00000012778 N 0.744
RBM22 Canis familiaris ENSCAFG00000018082 N 0.744
RBM22 Taeniopygia guttata ENSTGUG00000000850 N 0.744
RBM22 Meleagris gallopavo ENSMGAG00000006298 N 0.744
RBM22 Homo sapiens ENSG00000086589 N 0.744
RBM22 Dasypus novemcinctus ENSDNOG00000011166 N 0.744
RBM22 Cavia porcellus ENSCPOG00000001946 N 0.744
ENSCHOG00000013522 Choloepus hoffmanni ENSCHOG00000013522 N 0.744
Rbm22 Dipodomys ordii ENSDORG00000005329 N 0.744
ENSEEUG00000005638 Erinaceus europaeus ENSEEUG00000005638 N 0.744
RBM22 Gorilla gorilla ENSGGOG00000012947 N 0.744
RBM22 Pteropus vampyrus ENSPVAG00000014231 N 0.744
Rbm22 Mus musculus ENSMUSG00000024604 N 0.744
RBM22_BOVIN Bos taurus ENSBTAG00000035397 N 0.744
RBM22_BOVIN Bos taurus ENSBTAG00000030366 N 0.744
RBM22 Macaca mulatta ENSMMUG00000020683 N 0.744
RBM22 Anolis carolinensis ENSACAG00000014750 N 0.744
RBM22 Callithrix jacchus ENSCJAG00000020963 N 0.744
RBM22 Oryctolagus cuniculus ENSOCUG00000011532 N 0.744
ENSPPYG00000015955 Pongo pygmaeus ENSPPYG00000015955 N 0.744
RBM22 Pan troglodytes ENSPTRG00000017423 N 0.744
ENSOPRG00000008481 Ochotona princeps ENSOPRG00000008481 N 0.744
RBM22 Procavia capensis ENSPCAG00000015091 N 0.744
RBM22 Loxodonta africana ENSLAFG00000006638 N 0.744
GK11018 Drosophila willistoni FBgn0213029 N 0.742
gw.351.5.1 Nematostella vectensis gw.351.5.1 N 0.742
RBM22 Gasterosteus aculeatus ENSGACG00000018027 N 0.742
GI21935 Drosophila mojavensis FBgn0144664 N 0.742
ENSMLUG00000003461 Myotis lucifugus ENSMLUG00000003461 N 0.733
ENSCHOG00000001041 Choloepus hoffmanni ENSCHOG00000001041 N 0.733
rbm22 Xenopus tropicalis ENSXETG00000020435 N 0.733
RBM22 Monodelphis domestica ENSMODG00000009574 N 0.733
RBM22 Takifugu rubripes ENSTRUG00000004724 N 0.730
RBM22 Danio rerio ENSDARG00000010238 N 0.730
e_gw1.462.21.1 Capitella teleta e_gw1.462.21.1 N 0.722
Q7ZXB5 Xenopus laevis Q7ZXB5 N 0.722
ENSMODG00000006398 Monodelphis domestica ENSMODG00000006398 N 0.722
AAH45067 Xenopus laevis AAH45067 N 0.722
RBM22 Ornithorhynchus anatinus ENSOANG00000002314 N 0.717