Glyma08g43790.1 (Glycine max)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		Glyma08g43790.1 T00956_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Glyma08g43790.1 CCCH ZF 82 107
Glyma08g43790.1 RRM 243 303

Links

Other CCCH ZF,RRM family RBPs
Other Glycine max RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AT2G05160 Arabidopsis thaliana AT2G05160-TAIR-G N 0.701
cassava31399.valid.m1 Manihot esculenta cassava31399.valid.m1 N 0.770
cassava31400.valid.m1 Manihot esculenta cassava31400.valid.m1 N 0.770
cassava36931.valid.m1 Manihot esculenta cassava36931.valid.m1 N 0.747
cassava7063.valid.m1 Manihot esculenta cassava7063.valid.m1 N 0.759
Glyma14g01930.1 Glycine max Glyma14g01930.1 N 0.770
Glyma18g09020.1 Glycine max Glyma18g09020.1 N 0.954
GSVIVG00037782001 Vitis vinifera GSVIVG00037782001 N 0.759
Medtr3g077080 Medicago truncatula Medtr3g077080 N 0.793
Medtr5g102170 Medicago truncatula Medtr5g102170 N 0.701
mgf003557m Mimulus guttatus mgf003557m N 0.724
PK01281.1 Cannabis sativa PK01281.1 N 0.713
PK20504.1 Cannabis sativa PK20504.1 N 0.713
B9IAR9_POPTR Populus trichocarpa POPTR_0014s16340 N 0.747
ppa019338m Prunus persica ppa019338m N 0.816