mgf003557m (Mimulus guttatus)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		mgf003557m T00992_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf003557m CCCH ZF 159 184
mgf003557m RRM 324 384

Links

Other CCCH ZF,RRM family RBPs
Other Mimulus guttatus RBPs

14 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
cassava31400.valid.m1 Manihot esculenta cassava31400.valid.m1 N 0.759
cassava7063.valid.m1 Manihot esculenta cassava7063.valid.m1 N 0.759
cassava31399.valid.m1 Manihot esculenta cassava31399.valid.m1 N 0.759
B9IAR9_POPTR Populus trichocarpa POPTR_0014s16340 N 0.759
ppa019338m Prunus persica ppa019338m N 0.759
cassava36931.valid.m1 Manihot esculenta cassava36931.valid.m1 N 0.736
PK20504.1 Cannabis sativa PK20504.1 N 0.724
Glyma08g43790.1 Glycine max Glyma08g43790.1 N 0.724
GSVIVG00037782001 Vitis vinifera GSVIVG00037782001 N 0.724
MDP0000906147 Malus x domestica MDP0000906147 N 0.724
29223.m000023 Ricinus communis 29223.m000023 N 0.713
ppa003564m Prunus persica ppa003564m N 0.713
MDP0000214614 Malus x domestica MDP0000214614 N 0.713
27613.m000645 Ricinus communis 27613.m000645 N 0.701