CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AAEL010535
(
Aedes aegypti
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
AAEL010535
T01848_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AAEL010535-PA
CCCH ZF
97
122
PKSILCAFFKQGTCTKGDKCKFSHDL
AAEL010535-PA
CCCH ZF
186
202
YGWFWECPNGEKCIYRH
Links
Other
CCCH ZF
family RBPs
Other
Aedes aegypti
RBPs
23 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AGAP008634
Anopheles gambiae
AGAP008634
N
0.953
Cd36_81440
Candida dubliniensis
Cd36_81440
N
0.723
estExt_fgenesh1_pg.C_120215
Batrachochytrium dendrobatidis
estExt_fgenesh1_pg.C_120215
N
0.702
estExt_Genewise1.C_350015
Capitella teleta
estExt_Genewise1.C_350015
N
0.745
e_gw1.132.32.1
Postia placenta
e_gw1.132.32.1
N
0.702
CG8635
Drosophila melanogaster
FBgn0033317
N
0.889
GA21225-RA
Drosophila pseudoobscura
FBgn0081213
N
0.889
GF12572
Drosophila ananassae
FBgn0089609
N
0.889
GG10627
Drosophila erecta
FBgn0102935
N
0.889
GH21804
Drosophila grimshawi
FBgn0129265
N
0.889
GI20775
Drosophila mojavensis
FBgn0143510
N
0.911
GL11672
Drosophila persimilis
FBgn0149281
N
0.889
GM20672
Drosophila sechellia
FBgn0175554
N
0.889
GJ20510
Drosophila virilis
FBgn0207650
N
0.911
GE22859
Drosophila yakuba
FBgn0240063
N
0.889
fgenesh2_kg.7_#_69_#_840_2_CFPN
Serpula lacrymans
fgenesh2_kg.7_#_69_#_840_2_CFPN
N
0.702
fgenesh2_pg.scaffold_616000019
Branchiostoma floridae
fgenesh2_pg.scaffold_616000019
N
0.787
mgf000781m
Mimulus guttatus
mgf000781m
N
0.739
Sjc_0049010
Schistosoma japonicum
Sjc_0049010
N
0.766
Smp_099900
Schistosoma mansoni
Smp_099900
N
0.766
XP_001191490.1
Strongylocentrotus purpuratus
XP_001191490.1
N
0.766
XP_002493623.1
Pichia pastoris
XP_002493623.1
N
0.723
XP_785608.2
Strongylocentrotus purpuratus
XP_785608.2
N
0.766