mgf000781m (Mimulus guttatus)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 mgf000781m T05604_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
mgf000781m CCCH ZF 88 113
mgf000781m CCCH ZF 178 197

Links

Other CCCH ZF family RBPs
Other Mimulus guttatus RBPs

15 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAEL010535 Aedes aegypti AAEL010535 N 0.739
Smp_099900 Schistosoma mansoni Smp_099900 N 0.723
estExt_fgenesh1_pg.C_120215 Batrachochytrium dendrobatidis estExt_fgenesh1_pg.C_120215 N 0.723
PTRG_00525 Pyrenophora tritici repentis PTRG_00525 N 0.723
Sjc_0049010 Schistosoma japonicum Sjc_0049010 N 0.723
EEB90926.1 Moniliophthora perniciosa EEB90926.1 N 0.723
estExt_fgenesh2_pm.C_110045 Heterobasidion annosum estExt_fgenesh2_pm.C_110045 N 0.723
EAT85557.1 Phaeosphaeria nodorum EAT85557.1 N 0.708
SNOG_06906 Stagonospora nodorum SNOG_06906 N 0.708
estExt_Genewise1.C_350015 Capitella teleta estExt_Genewise1.C_350015 N 0.702
XP_001191490.1 Strongylocentrotus purpuratus XP_001191490.1 N 0.702
estExt_Genewise1.C_31474 Agaricus bisporus estExt_Genewise1.C_31474 N 0.702
fgenesh2_kg.7_#_69_#_840_2_CFPN Serpula lacrymans fgenesh2_kg.7_#_69_#_840_2_CFPN N 0.702
XP_002493623.1 Pichia pastoris XP_002493623.1 N 0.702
XP_785608.2 Strongylocentrotus purpuratus XP_785608.2 N 0.702