CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ZGPAT
(
Gorilla gorilla
)
CCCH ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
IPR000571
ENSGGOG00000004801
T02748_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000004705
CCCH ZF
176
200
SLKPCPFFLEGKCRFKENCRFSHGQ
ENSGGOP00000018406
CCCH ZF
176
200
SLKPCPFFLEGKCRFKENCRFSHGQ
ENSGGOP00000026125
CCCH ZF
165
189
SLKPCPFFLEGKCRFKENCRFSHGQ
Links
Other
CCCH ZF
family RBPs
Other
Gorilla gorilla
RBPs
25 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ARB_02284
Arthroderma benhamiae
ARB_02284
N
0.000
MCYG_06411
Microsporum canis
MCYG_06411
N
0.000
MGYG_06865
Microsporum gypseum
MGYG_06865
N
0.000
TERG_07192
Trichophyton rubrum
TERG_07192
N
0.000
TESG_05238
Trichophyton tonsurans
TESG_05238
N
0.000
TRV_04969
Trichophyton verrucosum
TRV_04969
N
0.000