MKRN2 (Oryzias latipes)
CCCH ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH) IPR000571 ENSORLG00000009824 T03138_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000012328 CCCH ZF 4 29
ENSORLP00000012328 CCCH ZF 35 58
ENSORLP00000012328 CCCH ZF 145 169
ENSORLP00000012328 CCCH ZF 301 327

Links

Other CCCH ZF family RBPs
Other Oryzias latipes RBPs

16 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAI06425 Xenopus laevis AAI06425 N 0.718
ABR68861 Xenopus laevis ABR68861 N 0.712
B0F0H3 Xenopus laevis B0F0H3 N 0.712
MKRN2 Anolis carolinensis ENSACAG00000013310 N 0.702
Q2YDI8_BOVIN Bos taurus ENSBTAG00000004512 N 0.712
MKRN2 Choloepus hoffmanni ENSCHOG00000005438 N 0.702
mkrn2 Danio rerio ENSDARG00000007630 N 0.748
MKRN2 Gasterosteus aculeatus ENSGACG00000003396 N 0.874
Mkrn2 Mus musculus ENSMUSG00000000439 N 0.728
MKRN2 Oryctolagus cuniculus ENSOCUG00000014171 N 0.702
MKRN2 Ochotona princeps ENSOPRG00000003501 N 0.709
MKRN2 Procavia capensis ENSPCAG00000016175 N 0.712
ENSPPYG00000013387 Pongo pygmaeus ENSPPYG00000013387 N 0.702
Mkrn2 Rattus norvegicus ENSRNOG00000009176 N 0.728
MKRN2 Tetraodon nigroviridis ENSTNIG00000004883 N 0.728
NP_001072101.1 Takifugu rubripes ENSTRUG00000003156 N 0.786